Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ASCSTQMASLANDCSALLGSN--DPEA---PTKDCCDAILAADTRCVCRYVTPMVVRLV----N---------MKRVVHIAATCGRNIPHGFKCGNYTVP
1HSS Chain:A ((18-106))
-----------PACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVD---------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47064 for 381 contacts (-123.5/contact) +
2D Compatibility (PS) -6288 + (NN) -2275 + (LL) 1156
1D Compatibility (HY) -3600 + (ID) 650
Total energy: -58721.0 ( -154.12 by residue)
QMean score : 0.336
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: