Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QDCNGLVTTVVSQCSGSYVNGSPPSAGCCGAARAV--SDGCLCPKVTPQIADAVN-----------KQRIQAMASACNRPLPRTCGALQFPSRK
1W2Q Chain:A ((58-118))
-------------------------QRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCD--------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16415 for 248 contacts (-66.2/contact) +
2D Compatibility (PS) -5163 + (NN) -1253 + (LL) 888
1D Compatibility (HY) -4800 + (ID) 500
Total energy: -27243.0 ( -109.85 by residue)
QMean score : 0.258
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: