Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACSNNYIQLAGCLNAVSSSA---GY---PGSSCCTAVSHFKNDVNCLCSTLVAAKNA-----GVI--------RNMPNALTVPKRCGFKNNIPKNFRCAGYKVGS
1HSS Chain:A ((16-103))
-------ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--SEWCRCGALYSMLDSMYKEH--GAFPRCRREVVKLTAASITAVCRLPI---------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31723 for 393 contacts (-80.7/contact) +
2D Compatibility (PS) -5975 + (NN) 396 + (LL) 688
1D Compatibility (HY) -3600 + (ID) 500
Total energy: -40714.0 ( -103.60 by residue)
QMean score : 0.359
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: