Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GCGPKLGVLLPCLPFLQGQGSNPTQPCCNGLETVVKSNPACLCALVNS--------QLGNR---INITLALSLPSLCNLAGVTIDLCN
3OB4 Chain:A ((428-489))
-----------------------QERCCNELNEFEN-NQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRA--PQRCD
General information:
TITO was launched using:
RESULT:
Template:
3OB4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39743 for 277 contacts (-143.5/contact) +
2D Compatibility (PS) -5093 + (NN) 600 + (LL) 308
1D Compatibility (HY) -800 + (ID) 650
Total energy: -45378.0 ( -163.82 by residue)
QMean score : 0.270
(partial model without unconserved sides chains):
PDB file :
Tito_3OB4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OB4-query.scw
PDB file :
Tito_Scwrl_3OB4.pdb
: