Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APSAAECKEERRLAINACKPVVYGKDPSPACCERARVTHIECVCPVITPKLAALI----D---------VNRAVRLIEGCGRKVPRHYKCGSITTP
1HSS Chain:A ((38-106))
---------------------------LRDCCQQLAHISEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVD---------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26032 for 249 contacts (-104.5/contact) +
2D Compatibility (PS) -4798 + (NN) -147 + (LL) 1796
1D Compatibility (HY) -1600 + (ID) 350
Total energy: -31131.0 ( -125.02 by residue)
QMean score : 0.260
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: