Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGNASPDTEAW--KLAPCEAAAQNEKA---------------------APSKSCCLQVKKIGQNPDCLCAVMLSNTA----------KSSGIKPEVAVTIPKRCNLADRPVGYKCGAYTLP
1PSY Chain:A ((17-116))
-------QCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV--RDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGV---------------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8361 for 467 contacts (-17.9/contact) +
2D Compatibility (PS) -7092 + (NN) -4309 + (LL) 384
1D Compatibility (HY) -1600 + (ID) 750
Total energy: -21728.0 ( -46.53 by residue)
QMean score : 0.214
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: