Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGKTPIQSAAASLSSCLSAAGNAKAKVPPTCCTKVTALINTAPKCLCAVVLSPLAK---KAG---------IKPAIAITIPKRCNIKNRPVGKKCGSYIIP
1HSS Chain:A ((37-106))
-----------------------------VLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEH-GAFPRCRREVVKLTAASITAVCRLPIVVD----------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24922 for 248 contacts (-100.5/contact) +
2D Compatibility (PS) -4758 + (NN) -623 + (LL) 1588
1D Compatibility (HY) -3600 + (ID) 500
Total energy: -32815.0 ( -132.32 by residue)
QMean score : 0.238
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: