Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---ISGKEENATCVMANLQICKSAV--------------TTGNPHSKECCEKLKEQ---------QSCFCEYLKDPLVVPYITYAKIILAACGLSFPNC----
1IGN Chain:A ((94-242))
KRKFSADEDYTLAIAVKKQFYRDLFQIDPDTGRSLIRTQSRRGPIAREFFKHFAEEHAAHTENAWRDRFRKFLLAYGIDDYISYYEAEEPMKNLTPTPGNYNS
General information:
TITO was launched using:
RESULT:
Template:
1IGN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26527 for 424 contacts (-62.6/contact) +
2D Compatibility (PS) -7538 + (NN) -3794 + (LL) 0
1D Compatibility (HY) -1200 + (ID) 600
Total energy: -39659.0 ( -93.54 by residue)
QMean score : 0.404
(partial model without unconserved sides chains):
PDB file :
Tito_1IGN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IGN-query.scw
PDB file :
Tito_Scwrl_1IGN.pdb
: