Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------QPVCPLNQSELGICVNVLGLISITTSNAAQCCS-----ILAGL-NNVSLVSVCACEAVRLNILNLLGITVNLNL-RLNGLLGLCR----LPVQPGFNCLL-------------------------------------
1QR0 Chain:A ((102-228))
QPIGIDIEKTK-PIS-------LEIA----------KRFFSKTEYSDLLAKDKDEQTDYFYHLWSMKESFIKQEGKGLSLPLDSFSVRLHQDGQVSIELPDSHSPCYIKTYEVDPGYKMAVCAAHPDFPEDITMVSYEELLRAAA
General information:
TITO was launched using:
RESULT:
Template:
1QR0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39261 for 332 contacts (-118.3/contact) +
2D Compatibility (PS) -7253 + (NN) -844 + (LL) 1040
1D Compatibility (HY) -1200 + (ID) 400
Total energy: -47918.0 ( -144.33 by residue)
QMean score : 0.264
(partial model without unconserved sides chains):
PDB file :
Tito_1QR0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QR0-query.scw
PDB file :
Tito_Scwrl_1QR0.pdb
: