Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFLNTHPKKKEIVAEFNNEHYINESDLKTLEEGKD-LVDKINNINLIQQNEESEELNIGKVLA
1DOW Chain:B ((118-149))
-----------------------HPTNVQRLAEPSQMLKHAVVNLINYQDDAELA---------
General information:
TITO was launched using:
RESULT:
Template:
1DOW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5527 for 101 contacts (54.7/contact) +
2D Compatibility (PS) -3062 + (NN) -1427 + (LL) 2620
1D Compatibility (HY) -800 + (ID) 300
Total energy: 2558.0 ( 25.33 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_1DOW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DOW-query.scw
PDB file :
Tito_Scwrl_1DOW.pdb
: