Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKKYDETKVKPAISTSQEPKRINGSKFQSVLSKRRYDINFDDKK-YAVKTVKTRFLETEQQSSKLRDLLESIPVIGRFLAKIFTSEKETYK-KLQLQIDRSSKIRNESRIDDKY-TEEISSKLKKSNIEQVDDKKSRSP---- |
| 4K0D Chain:A ((5-147)) | -IAASADAQLELIGPRAAAAASLESAVLHVSLTARAYALTPEPARMDALQAALRRLEGAAARFAALPKSPEGAALSGRILAAVPPFEKAAVALGTAVATGGDDSAIRAREATLPPMREELLSLLRTFGALQQAHDAGASHTILA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K0D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 80584 for 926 contacts (87.0/contact) +
2D Compatibility (PS) -14158 + (NN) 1829 + (LL) 208
1D Compatibility (HY) 800 + (ID) 950
Total energy: 68313.0 ( 73.77 by residue)
QMean score : 0.163
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