Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MESRRGRIRPENSARELRLRQNRRNTGRMMMKEVTEGLRQFELKSEIERREREPETFEDGTRKLLMGLT
2KJF Chain:A ((1-60))
--LVAYGIAQGTAEKVVSLINAGLTVGSIISIL---GGVTVGLSGVFTAVKAAIAK--QGIKKAIQL--
General information:
TITO was launched using:
RESULT:
Template:
2KJF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 21735 for 384 contacts (56.6/contact) +
2D Compatibility (PS) -6537 + (NN) -151 + (LL) 1124
1D Compatibility (HY) -2000 + (ID) 350
Total energy: 13821.0 ( 35.99 by residue)
QMean score : 0.360
(partial model without unconserved sides chains):
PDB file :
Tito_2KJF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KJF-query.scw
PDB file :
Tito_Scwrl_2KJF.pdb
: