Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWIKNKVFNRRAFILGGIQLTISTIFSCRLYSLQIRNRQKYEKLADNNRIRVAAIMPKRGRILDRNGIELAVDKISYIVLFDKQKIS------S-------------E------------------------------------------------------------------------------------EVDWETLSEIESNVTKSSETKITALYKRHYPFGSICSHTLGYTKKQQ-----------------GINEAGISGIEYTYDHILKGKPGRSEQEINSKKRIVRELSSIPQQDGQDVQLTIDIDLQEKIAEIFKG-------------HKGSVTAIDVGNGEILTLYNSPSYDNNLFANKLSNEAWEGLNTPSLPLVNRALSYQIPPGSIFKIIVALAGLKDGIITPEEKFSCVGY-MKIGERRFCCLKS-KVHGYVSLNEAMALSCNTYFYNIGKKIS-----------------VDSLVEMARKFGIGSGPLIGAFKEEAPGLLPDKDWRTRKLYSEWYLGDTVNLVIGQGYVLTTPLQLAVLAARIAT-GKEVIPRIEMSKTMQD-------F-P----DI--D-I-AHEHLSIVRKAMFNMVNIKAGTYRKGL-S-SIRIAGKTGTPEINSK-GESHKLFIAYGPYHDPRYAISVFIEYGK---APRQDVAMANEILRYMLKG |
| 3VSK Chain:A ((47-678)) | ------------------------------------QGSHYKQIIKNDENITVNESVPRGRILDRNGKVLVDNASKMAITYTRGRKTTQSEMLDTAEKLSKLIKMDTKKITERDKKDFWIQLHPKKAKAMMTKEQAMLADGSIKQDQYDKQLLSKIRKSQLDELSSKDLQVLAIFREMNAGTVLDPQMIKNEDVSEKEYAAVSQQLSKLPGVNTSMDWDRKYPYGDTLRGIFGDVSTPAEGIPKELTEHYLSKGYSRNDRVGKSYLEYQYEDVLRGKKKEMKYTTDKSGKVTSSEVLNPGARGQDLKLTIDIDLQKEVEALLDKQIKKLRSQGAKDMDNAMMVVQNPKNGDILALAGKQINKSGKMT----------------DYDIGTFTSQFAVGSSVKGGTLLAGYQNKAIKVGETMVDEPLHFQ-GGLTKRSYFNKNGHVSINDKQALMHSSNVYMFKTALKLAGDPYYSGMALPSDISSPAQKLRRGLNQVGLGVKTGI-DLPNETRGQIEPL---------TNNPGNYLDLSIGQY-DTYTPLQLSQYVSTIANDGYRIQPHIGLTIHESTNKDEVGPLKKKINGTVLNKVNNTEKEIKQIQEGFKMAFNDKDGTGYVSFKDTVVPTAGKTGTAEVFQ-EPRVNSTYIGYAPIDDPKLAFSIVYTNQPVPPPWLTGGDLGRDVINYYFK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VSK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -190590 for 3820 contacts (-49.9/contact) +
2D Compatibility (PS) -47630 + (NN) -13054 + (LL) 4652
1D Compatibility (HY) -10000 + (ID) 5050
Total energy: -261672.0 ( -68.50 by residue)
QMean score : 0.443
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