Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMKRSIVFDALLILCISFFPIHANESCSNDGQFVENLMLADESTCHKSRKYNGREVI----SVKDKKLDFYVSANSGKIYSDNSETFVNGIKAIGERVPTLVESRYGTIIKNMVADEIESVKKFDDEIDFQWL----NSISLGYYAGENGRIDFETMYSKVNIKNGNSFPI--FDRSAGIFAFLLNFYYNPSIQDTQIAPYVGLGIGP-----TVFRLRKINGSPQNSMPLNVPWFA--YQVKLGVSYSIIPEIKTFLGYRYFSIPIPIADDISTHNIEIGLIFNF-------- |
| 3IJD Chain:A ((3-305)) | LLKQKILNRESGIITYGITPPKKNNT-------EEKIKEISQKHIERISGLDIDGLVIYDLQFIETIDPQIYSENYLKDLKIPKIIYRCVGKYTPDEFRRLTRPVSGQDAFSVFVGAASVLLKLSDAYKIRQDVNPDLLLGGVAIPERHMKNTDEHLRIIDKINKGCKYFITQAVYNVEAAKDFLSDYYYYSKNNNLKMVPIIFTLTPCGSTKTLEFMKWLGISIPRWLENDLMNCEDILNKSVSLSKSIFNELMEFCLEKGIPIGCNIES-VSVRKVEIEASIALAKDIKYIM |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IJD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61426 for 2006 contacts (-30.6/contact) +
2D Compatibility (PS) -26960 + (NN) 1135 + (LL) -124
1D Compatibility (HY) -6800 + (ID) 1750
Total energy: -95925.0 ( -47.82 by residue)
QMean score : 0.094
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