Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLLASLPEGHTIIGLQFENLMLNNRKSIPNILGIDEIISENLFFQRKTGNSAIYQIDYIIRTKFNTLYICEIKFSKNRIGHSIM
1OB8 Chain:A ((6-59))
--------------GKNAERELVSILRG----EGFN-AV-RIPT---------NPLPDIFATKG-NTLLSIECKSTWENKVKVKE
General information:
TITO was launched using:
RESULT:
Template:
1OB8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18960 for 270 contacts (-70.2/contact) +
2D Compatibility (PS) -5420 + (NN) -1668 + (LL) 1704
1D Compatibility (HY) 1200 + (ID) 450
Total energy: -23594.0 ( -87.39 by residue)
QMean score : 0.175
(partial model without unconserved sides chains):
PDB file :
Tito_1OB8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OB8-query.scw
PDB file :
Tito_Scwrl_1OB8.pdb
: