Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVDYEEIFLNKIKDIKEEGRYREFTHFASLPGRLPYIMDCERNR------EVIVWCSNNYLGMSQNESVVAAIQNS----SVGAGGTRNISGTTKEVVELEQSLACLHNKEAALTFACGYLANQTTLSTLSSVIPDVVIFSDEKNHSSMIEGIKSGKRPKHIFKHNNVDHLEQLLKSVDRKTPKIIAFESIYSMDGDIAPLREICNLADQYNAITYLDEVHAIGMYGLRGGGIAEREGLMDRVTVIQGTLSKAFGVMGGYIASSKSLVDVIRSSAPGFIFTTAMSPVLAAAAKASVEHLKSSNVE--REKQRQVVEKVKNSLSSVGINFIPTETHIIPIIIGDPELSKRASKLLFDEYGVYVQHINYPTVPRGTERFRITPTPYHTDEMIEHLTESLIKVFVKLSVSVACLC |
2BWN Chain:E ((2-399)) | --DYNLALDKAIQKLHDEGRYRTFIDIEREKGAFP---KAQWNRPDGGKQDITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQKEAALVFSSAYNANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHNDVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFGGYIAASARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALGMPIIDHGSHIVPVVIGDPVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWAR--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BWN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203470 for 3382 contacts (-60.2/contact) +
2D Compatibility (PS) -42089 + (NN) -18617 + (LL) 1840
1D Compatibility (HY) -36000 + (ID) 9550
Total energy: -307886.0 ( -91.04 by residue)
QMean score : 0.547
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