Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVMNTYAKSGVDLKLYNKLMKEVKLVVDENKREEVISEVGSFSALFDFAALSKKYDHPVLVSSTDGVGTKLLIAQEVDKHDTIGIDLVAMCVNDLLAQGATPLFFLDYFATGALNKDVLLSVVQGITEGCKQAKITLVGGETAEMPGMYGNNHYDLAGFVVGVVDKSKILPNYGVMRAGDYIVGLESSGIHSNGFSLVRHIFED-LGISYNDLSPWDNQLWGEVLLKPTKIYVDSLLPI--MSQVKGIAHITGGGLIDNVPRILPKNLFADVDISSLEWPDIFLWLTKEGKVEKREMLRTFNCGIGMILIIDPENMQGVKNHFQKLGEKIEIIGKLNEKYNPSFNGVVS |
| 2Z01 Chain:A ((17-340)) | -----------------QAVALMKEHVQKTMRPEVLG-----GGLFDLSAL--GYRQPVLISGTDGVGTKLKLAFLLDRHDTIGIDCVAMCVNDIIVQGAEPLFFLDYIACGKAVPEKIAAIVKGVADGCVEAGCALIGGETAE--------EYDLAGFAVGVAEKERLITG-ETIQAGDALVGLPSSGLHSNGYSLVRRIVFEQAKLSLDEIYEPLDVPLGEELLKPTRIYAKLLRSVRERFTIKGMAHITGGGLIENIPRMLPPGIGARIQLGSWPILPIFDFLREKGSLEEEEMFSVFNMGIGLVLAVSPETAAPLVEWLSERGEPAYIIGEVAKGAGVSFAG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z01.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -231661 for 2654 contacts (-87.3/contact) +
2D Compatibility (PS) -32600 + (NN) -13380 + (LL) 1384
1D Compatibility (HY) -30000 + (ID) 7100
Total energy: -313357.0 ( -118.07 by residue)
QMean score : 0.531
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