Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLDKMYEECGVFGISCNKDSAFDSILGLHALQHRGQESFGVVTSNN-DKLHSYHFQGQVSSVLDNIDEIKKSLPGNYAIGHVRYSTSG-N-KSGVQPILGKSNKFGDFAIAHNGNLINISPIREQLIKQ-GRVFQSDIDTEVVARLVEANT---------KNSFLGSFIYALKQIQGAYSFVAINR-EVVVGVRDSAGIRPLVLGKLN-----SSYVLASETCALDIVNAEFIREIEPGELVTIDQNGNLASAFPLSQQKSSFCIFEYIYFSRPDSIIEDRSIYDIRKEIGRTLAEESPPK---NNVDMVVPIPDSGIPAAIGYTKYSGLPIELGIIRNHYIGRTFIQPTAEVRKVRIKLKFNANKDILKGKNIILIDDSIVRGSTLKSIIVMLKDAGVKEIHLKISSPPIKYSCFYGIDTPECKDLIAASKSVREIEAIIGVNSLTFLSIDGLYQAVNGEKRNNTAPQYCDACFTGDYPIGK |
| 1ECF Chain:A ((1-468)) | --------CGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFRLRKANGLVSDVFE--ARHMQRLQGNMGIGHVRYPTAGSSSASEAQPFYVNS--PYGITLAHNGNLTNAHELRKKLFEEKRRHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAATNRLIRGAYACVAMIIGHGMVAFRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLGFDFLRDVAPGEAIYITEEGQLFTRQCADNPVSNPCLFEYVYFARPDSFIDKISVYSARVNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNVYGIDMPSATELIAHGREVDEIRQIIGADGLIFQDLNDLIDAVRAE--NPDIQQFECSVFNGVYVTKD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ECF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -303055 for 4085 contacts (-74.2/contact) +
2D Compatibility (PS) -47817 + (NN) -16300 + (LL) 1152
1D Compatibility (HY) -33200 + (ID) 8100
Total energy: -407320.0 ( -99.71 by residue)
QMean score : 0.508
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