Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNINIFVFLALSFVTSFNSIQAQILYTWSQVIPDNKLSVRAIIDSNTCPVAYVDGKGVEMLNRSSINNGDHTETICEMIVETGAQNISIDGIQVPILPEKISRIAFIGDTGCRINALFQQECNSVDSWPFKKNLDSIALH------EPDLIVHVGDYHYRKTKCRNAQKCGNIYGYNKEAWYADWFEPAKDILLQSSFLFVRGNHENCDRAYEGWFRYLDSHPFSSEKCENFVPGWFLDIGPMKFFIFDSSSGEDIFTTQSTIDAFEKQFDKLTQDSSDKPTWFLTHRPLWRSPKKEFLTLKSHGNLTQIEAFGDKFPNNVATIVSGHIHIAQILLMNNVPDQIIVGNGGALLHAQDQEPVYQNIEFSYSNGKNYLAHEIKNFFGFGFSILNLDNHEFTFYDQNNEEMYSAKLTEDFKLEIN |
2DXN Chain:A ((1-271)) | -----------------------------------------------------------------------------------------------------MLLAHISDTH-----FRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGD----------------IVNCGRPEEYQVARQILGS--LNYPLYLIPGNHDDKALFLEYLQPLCPQLGSDANNMRCAV-----DDFATRLLFIDSSRAGTSKGWLT--DETISWLEAQLFEGGDKPATIFMHHPP-LPLGNAQMDPIACENGHRLLALVERFPS-LTRIFCGHNHSLTMTQYRQ----ALISTLPGTVHQVPYCHEDTDPYYDLSPASCLMHRQVGEQWVSYQHSLAHYAGPWLYDENISCPT-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DXN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98677 for 2203 contacts (-44.8/contact) +
2D Compatibility (PS) -28421 + (NN) -8819 + (LL) 10492
1D Compatibility (HY) -4400 + (ID) 1900
Total energy: -131725.0 ( -59.79 by residue)
QMean score : 0.309
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