Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDGACSGNPGTGGWAAIILFQDYRKDVYGREENTTSNKMELTAVINGLKALKFSCNINLYTDSLYVKSGITEWVSKWKVNGWKTSSKRSVKNIELWKELDNIASQHKINWKWVKAHNGDKHNEEANNLARKAIIDA
2ZQB Chain:C ((12-142))
-DGSCLGNPGPGGYGIVMKYKGHTKEMSGGFSLTTNNRMELLAPIVALEALKEPCKIILTSDSQYVRQGIMTWIHGWKKNGWMTSNGTPVKNVDLWKRLDKAAQLHQIDWRWVKGHAGHAENERCHQLARAAAEAN
General information:
TITO was launched using:
RESULT:
Template:
2ZQB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18634 for 952 contacts (-19.6/contact) +
2D Compatibility (PS) -14109 + (NN) -6422 + (LL) 208
1D Compatibility (HY) -8800 + (ID) 3150
Total energy: -50907.0 ( -53.47 by residue)
QMean score : 0.411
(partial model without unconserved sides chains):
PDB file :
Tito_2ZQB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZQB-query.scw
PDB file :
Tito_Scwrl_2ZQB.pdb
: