Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVLVIGSGG-REHALLWTLKKSPILTELYITPGRPAMGNLGVLVNINIQNSIDMTRFCKRENIELVIIGPEQPIIDGLADNLVAEGINVFAPSQAAAKLEASKSFTKGICKQYGIPTAKYECFVDERLAKSFVRSNKIKFPLVVKANGIAAGKGVIVCNTENEAFSAIDSMLVEKKFGESGEEIIIEEFLVGEEVSFFALVDGLKVVTLGCAKDYKRVDENNDSRNTGGMGSYSSPSIISKDM-EQKIIQRIIYPTIQALANMGTPYRGVLFAGLITCKDSPKLLEYNVRFGDPEAQSMLPRFDASCDLLELMLSVAKGKLSAKTVELNSKATVCVVVASKGYPGDYQKGEIIKGLAKIESIPGVLVFHAGTKLDESGNWVSDGGRVLNIVGEGNTLEEAKSKVYSALNFLEWPGGFFRYDIGS |
| 2YRX Chain:A ((22-434)) | MNVLVIGRGGREHAIAWKAAQSPL-VGKLYVAPGNPGIADVAELVHIDELDIEALVQFAKQQAIDLTIVGPEAPLASGIVDRFMAEGLRIFGPSQRAALIEGSKAFAKELMKKYGIPTADHAAFTSYEEAKAYIEQK--GAPIVIKAD----GKGVTVAQTVEEALAAAKAALVDGQFGTAGSQVVIEEYLEGEEFSFMAFVNGEKVYPLAIAQDHKRAYDGDEGPNTGGMGAYSPVPQISDEMMDAAL-EAILRPAAKALAAEGRPFLGVLYAGLMATANGPKVIEFNARFGDPEAQ-VVLPRL-KTDLVEAVLAVMDGKELELEW-TDEAVLGVVLA-AKGYPGAYERGAEIRGLDRIS--PDALLFHAGTKR-EGGAWYTNGGRVLLLAAKGETLAKAKEKAYEQLAAIDCDGLFYRRDIGR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2YRX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -236268 for 3581 contacts (-66.0/contact) +
2D Compatibility (PS) -45012 + (NN) -24128 + (LL) 1460
1D Compatibility (HY) -27200 + (ID) 8650
Total energy: -339798.0 ( -94.89 by residue)
QMean score : 0.509
|
|
|