Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIIKTIEEKIRGSIDVIDVDIIDESVKHADHYFSSSSMLPSHIKLVLISDNFAGMDSLKRHRLIYELLKSEIEL-IHAISLHLYTQSEYNLKNK
2DHM Chain:A ((8-96))
MMIRERIEEKLRAAFQPVFLEVVDESYRHNVPA-----GSESHFKVVLVSDRFTGERFLNRHRMIYSTLAEELSTTVHALALHTYTIKEWEGLQD
General information:
TITO was launched using:
RESULT:
Template:
2DHM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60129 for 530 contacts (-113.5/contact) +
2D Compatibility (PS) -9215 + (NN) -286 + (LL) 20
1D Compatibility (HY) -6800 + (ID) 1750
Total energy: -78160.0 ( -147.47 by residue)
QMean score : 0.482
(partial model without unconserved sides chains):
PDB file :
Tito_2DHM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DHM-query.scw
PDB file :
Tito_Scwrl_2DHM.pdb
: