Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNSLNSKTTLNVSGKSYGYFSLNAASKF-LGIDLAKLPCSLKVLLENLLRNEDEVNVRLDDIKTLAGCVKKHVNH-EISYKPARVLMQDFTGVPAIVDLASMRSYVKKKGGNPSKINPSVPVDLVIDHSVQVDSYGNTSAFGKNVELEIKRNLERYQFLKWGESSFTNFRVVPPGTGICHQVNLEYLAQVVCNESGVVYPD-TLVGTDSHTTMVNGLSVLGWGVGGIEAESVMIGQPISMVIPEIVGFKLMGRLPEGVTATDLVLTITNILRAKGVVGKFVEFYGDGLDYLSLADRATIANMAPEYGATCGFFPIDQKTLDYLSLTGRPEGLIKLVEVYAKEQGLWRSGEELAFFDILELDLSGVEPVMAGPKRPQDKVSLSQVAESFSTSFSVNESKENDKLQDGSVVIAAITSCTNTSNPSVMIAAGLIARKAIKFGIKSKPWVKTSLAPGSRVVTKYLEKSGLQKNLNTLGFNLVGYGCTTCIGNS-GP-LNKDIEDDIKNKNLTVAAVLSGNRNFEGRIHPL-VKANYLASPPLVVVYALAGTVQVDLTKDSICKDKNGNNVYLKDIWPTNNEIEDCVRSVVTCEMFMQKYKDVFSGDEHWQKIKYE-RGEIYNWDTKSTYIQNPPYFDDLLAGNDKDNVIDIKNARVLAMFGDSVTTDHISPAGNIASNSPAGIYLKNLGIEPQDFNSYGSRRGNHNVMMRGTFANIRIKNEMISNEGGYTKHIPSQETMSIFDTAMRYKEEAVPLVVIAGKEYGAGSSRDWAAKGTLLLGIKAVIAESFERIHRSNLVGMGVLPLIFQGGVTRRIFDSSEIISIKG--EIVPSGNLECIIKRKDNSEQSIQLKCCVQTATEVKYLMSGGVLSYILAQSS |
| 1C96 Chain:A ((13-752)) | ---------------EYIRYDLLEKNIDIVRKRLNRPLTLSEKIVYGHLDDPAN------QEI---------ERGKTYLRLRPDRVAMQDATAQMAMLQFISS-------G-LPKVAVPS---TIHCDHLIEAQLGG-----EKDLRRAKDINQEVYNFLATAGAKY-GVGFWRPGSGIIHQIILEN----------YAYPGVLLIGTDSHTPNGGGLGGICIGVGGADAVDVMAGIPWELKCPKVIGVKLTGSLSGWTSPKDVILKVAGILTVKGGTGAIVEYHGPGVDSISCTGMATICNMGAEIGATTSVFPYNHRMKKYLSKTGRADI-ANLADEFKD---HLVPDPGCHYDQVIEINLSELKPHINGPFTPDLAHPVAEVGSVAEK-----------EGWPLDIRVGLIGSCTNSSY-EDMGRSAAVAKQALAHGLKCK--SQFTITPGSEQIRATIERDGYAQVLRDVGGIVLANACGPCIGQWDRKDIKKG---------EKNTIVTSYNRNFTGRNDANPETHAFVTSPEIVTALAIAGTLKFNPETDFLTG-KDGKKFK--LEAPDADELPRAEF---------------DPGQDTYQHPPKDSSGQRVAVSPTSQRLQLLEPFDKW-------DGKDLEDLQILIKVKGKCTTDHISAAGPW---------LKFRGHLDNISNNL-------------LIGAINIENRKA----NSVRNAVTQEFGPVPDTARYYKQHGIRWVVIGDENYGEGASREHSALEPRHLGGRAIITKSFARIHETNLKKQGLLPLTFADPADYNKIHPVDKLTIQGLKDFAPGKPLKCIIKHPNGTQETILL-NHTFNETQIEWFRAGSALNRMKELQQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1C96.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -341852 for 7097 contacts (-48.2/contact) +
2D Compatibility (PS) -77855 + (NN) -23351 + (LL) 5960
1D Compatibility (HY) -24400 + (ID) 10750
Total energy: -472248.0 ( -66.54 by residue)
QMean score : 0.443
|
|
|