Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDLGPIIENWHEWLRCYRSYSSNTLESYMRDLKDFISFLSAHIGEEVNVGSLEKLSVPELRSWFSFRYARGINARSNTRALSVIRNFFKYIKNNYEVNNEAVFSLSRPIQRRTLPKALSISDIKTLVDFFLHNYSLQETHSSLSFQYATKKKESVLSTQLYKHCNFSLPGFQCSDTRKLIINKRTLSIKNWIPVLSIGTTEGNTKTSVKEIKLLDLGEPWIIKREIAIIVLLYGTGLRISEALNLKVSDIS-NESLIV-TGKGDKQRQVFILPVVKMFIQEYVKACPYLSVNNEAQHLFVGVRGKKLGRTYVANRLQKIRRMLNL--PEIVSPHAFRHSFATHLLQENVDIRFIQQLLGHSSLETTQVYTHLNYQDVFNMYKNFQQSLEKDKKLKL |
1AIH Chain:A ((25-160)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PDLGLIVRICLATGARWSEAETLTQSQVMPY-KITFTNTKSKKNRTVPISDELFDMLPKKR------------GRLFNDAY----------ESFENAVLRAEIELPKGQLTHVLRHTFASHFMMNGGNILVLKEILGHSTIEMTMRYAHFAPSHLESAVKFNPLSNPAQ----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1AIH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -85266 for 861 contacts (-99.0/contact) +
2D Compatibility (PS) -14209 + (NN) -2169 + (LL) 16952
1D Compatibility (HY) -3600 + (ID) 1600
Total energy: -89892.0 ( -104.40 by residue)
QMean score : 0.376
|
|
|