Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNYRFGTKVLIIGSGAAGYAAAIYAARANLEPVVVTGMQP-----GGQLTITMGVENYPGFVS-IQGPELMKQMRLHVEKVGAEIVNDEIKSVEQLEYSNEYKFRSSGNND--DYYSNAVIIAAGSQAKWLGLESERKFQGYGVSACATCDGA--FFRNKIVAVIGGGNTAVEEAIFLTRFAKEVILIHRRDKLRAEKIMQDRLFANNKIKVIWNHTVEQVLGEENPKKVTGITIKSTKIDEIQELRVNGVFIAIGHAPNTGVFKSFIEMDEQGYIITKPGTTLTSRAGVFAAGDVQDKVYRQAVVAAGTGCMAALDAEKFLECTSK |
| 3ITJ Chain:B ((24-334)) | --------KVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTEIITETVSKVDL--SSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRASTIMQKRAEKNEKIEILYNTVALEAKGDG--KLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAGQVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAEKYLTSLE- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3ITJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -229265 for 2723 contacts (-84.2/contact) +
2D Compatibility (PS) -31930 + (NN) -8042 + (LL) 560
1D Compatibility (HY) -22000 + (ID) 7300
Total energy: -297977.0 ( -109.43 by residue)
QMean score : 0.541
|
|
|