Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVENE-GVLLVLSSPSGAGKTTILERLLER-STNLVRSVSMTTRKPRPGEINGKDYFFVTKKEFHELCEAGQMLEYARVFENFYGIPKSFIEQNLSSGISVLLSIDWQGAFHLFELMREKVISVFILPPSMEELRLRLQKRNSDSASEIEHRLAEAQKEMSKRDKYDYVVINDDIDKSVEEISSILDKERLKRSGV
4QRH Chain:C ((6-197))
----NEKGLLIVLSGPSGVGKGTVRKRIFEDPSTSYKYSISMTTRQMREGEVDGVDYFFKTRDAFEALIKDDQFIEYAEYVGNYYGTPVQYVKDTMDEGHDVFLEIEVEGAKQVRKKFPDALF-IFLAPPSLEHL------------------INEARKEVEMMNLYDYVVVNDEVELAKNRIQCIVEAEHLKRERV
General information:
TITO was launched using:
RESULT:
Template:
4QRH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86793 for 1250 contacts (-69.4/contact) +
2D Compatibility (PS) -18925 + (NN) -9789 + (LL) 1916
1D Compatibility (HY) -18000 + (ID) 3600
Total energy: -135191.0 ( -108.15 by residue)
QMean score : 0.565
(partial model without unconserved sides chains):
PDB file :
Tito_4QRH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QRH-query.scw
PDB file :
Tito_Scwrl_4QRH.pdb
: