Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYVCGPTVYDTAHIGNARSIVVYDVLFQLLKFCYGKATYVRNITDIDDKIINAANEKDSSIESISTYYTRAFHEDMRSINCVEPTHEPKAAENIKYIIELIEYLLQSGHAYES-NKHIYFSIESYPEYGALSGKKIDELEHGSRVEVGENKKHPGDFVLWKPANDTDYKLSSYWNSPWGEGRPGWHIECSAMSYAYLGKDFDIHGGGIDLQFPHHENEIAQNKSAFAGSMFAKYWVHNGSLTVNKEKMSKSLFNIVKVRDLLDSGIKGEVIRYALFKTHYRKPLDWTESVISESQETLNKFYRLLRGIDV-ASIEKSDVEVSRDFIETLKNDLNIPEALAILHEMATKINKTNNENEK--LKLTESFIKSARFIGLLESSYQEWFTAGISYQEIKRLIDLRKVAKQNKDYDAADKIRDQLKQMGVTISDNEDGTTTW |
1LI5 Chain:A ((25-402)) | MYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVAMVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQ----------------KRNPMDFVLWKMSKEG----EPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCA-HDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKY-YDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAP-AGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFL---------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LI5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180593 for 2993 contacts (-60.3/contact) +
2D Compatibility (PS) -37509 + (NN) -8909 + (LL) 4604
1D Compatibility (HY) -32000 + (ID) 7900
Total energy: -262307.0 ( -87.64 by residue)
QMean score : 0.528
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