Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEERYSTKRITVKEIDEILYEEHRVLDHGFIRVVDYMGSDSAIVQAARVSYGKGTKQINQDEVLIKYLMRYHHTTPFEMCEIKFHVKLPIFIARQWIRHRTANVNEYSARYSILDHEFYIPEPEQVAKQSDNNKQGSGEAFDLDISKEIIDSLIND-SNLVYSHYNKFIEQGLTREIARTNLTLNYYTQFYWKVDLHNLLHFLKLRADKRAQHEIRVYAEVILDIVKKWVPLVHSAFVEYCLESACISRTGLGIIRKLIRGENVTREESNIGKREWEELMFILDKQPER
1O29 Chain:D ((17-221))
-------------------------ILDKGFVELVDVMGNDLSAVRAARVSFDM---DEERDRHLIEYLMKHGHETPFEHIVFTFHVKAPIFVARQWFRHRIASYNELSGRYSKLSYEFYIPSPERL------------EGYKTTIPPERVTEKISEIVDKAYRTYLELIESGVPREVARIVLPLNLYTRFFWTVNARSLMNFLNLRADSHAQWEIQQYALAIARIFKEKCPWTFEAFLKYAYKGDILKEV---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1O29.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -156731 for 1507 contacts (-104.0/contact) +
2D Compatibility (PS) -21002 + (NN) -1252 + (LL) 5216
1D Compatibility (HY) -19200 + (ID) 4800
Total energy: -197769.0 ( -131.23 by residue)
QMean score : 0.435
(partial model without unconserved sides chains):
PDB file :
Tito_1O29.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O29-query.scw
PDB file :
Tito_Scwrl_1O29.pdb
: