Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLNKDLVDHDLSDEVCELLPASRHKTYVVKVGQVKIGGNNPIVVQSMALGVHIDSDNVKSSAKRYAKEIIELAHAGSELVRIALNSEEVARAVPYIVEEINKEGF-DGKILVGCGQYELDKLVRNYPDNIKMLGKIRINPGNIGFGDKHDEKFERVIEYAITHDIPVRIGVNWGSLDKYLLQKLMDENSLSNNPKSSDVILRKALVMSALNSAQKAEEIGLSLDKIVISCKVSRVQDLISVYTALAKSSNYALHLGLTEAGTGNKGMISTTAGLTYLLQNGIGDTIRASLTQRPGEPRVNEVAVCQEILQSIGLRHFNPQVNSCPGCGRTNSDRFRILTEEVNDYIKIRMPTWKKKNPGVEHMNIAVMGCIVNGPGESKHANLGISLPGYGEKPISAVYKDGKYFKTLQGDNIFEEFKAIIDDYVKEHYT |
3NOY Chain:B ((13-360)) | ----------------------KRKTRQIRVGNVKIGGDAPIVVQSMTSTKTHDVEATLNQIKR-------LYEAGCEIVRVAVPHKEDVEALEEIVKKSPMPVIADIHFAPSYAFLSMEKGVHG----------IRINPGNIG----KEEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKY-------GYPSA------EALAESALRWSEKFEKWGFTNYKV--SIKGSDVLQNVRANLIFAERTDVPLHIGITEAGMGTKGIIKSSVGIGILLYMGIGDTVRVSLTDDP----VVEVETAYEILKSLGLRRRGVEIVACPTCGRIEVDLPKVVKEVQEKLSGVKTP-----------LKVAVMGCVVNAIGEAREADIGLAC-GRG---FAWLFKHGKPIKKVDESEMVDELLKEIQNME----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NOY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138763 for 2913 contacts (-47.6/contact) +
2D Compatibility (PS) -37618 + (NN) -9658 + (LL) 4336
1D Compatibility (HY) -22800 + (ID) 6700
Total energy: -211203.0 ( -72.50 by residue)
QMean score : 0.505
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