Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKFRAIQSKNKSILSREVHAAEFIPYSCYWNSTTLITKQDWLVKFIKLSGFAFETADDEDLVIQNNIRNQMLRSISSPAFGLYFHTIRRKKNIFSDEFASQNFPNFFANHVNLKWREKHATRQSFINDLYITIIRRADTKGVEFLSHLLKKFGHVTSKHAWESDMRATYEDLEETTNRVMTNLRSYSPKILGVKETPNGLFCEIMEFLSRIVNCGFITNTLLPLKTEISRYLPVHRLFFGRKMIQVVTHNESKYAGIVSIKEYGNNTSAGMLDHFLQLPYEFIITQSFQFTNRQMAIAKMQIQQNRMIQSADKAISQIAEISHALDDAMSGRIVFGEHHLTILCIEKSPKSLDNALSFVESELSNCGVYPIREKVNLEPAFWAQVPGNFDYIVRKGTISSLNLAGFVSQHNYPTGNKFNNHWGDAVTVFDTTSGTPFFFNFHIRDVGHT----MIIGPTGAGKTVLMN-FLCAQA-MKFSPRIFFFDKDRGAEI-FLRALGGIYTLIEPRTKTNFNPLQLDDTPDNR-TFLMEWIKSLISVYNDKFTSEDITRVNDAIEGNFK------------LRKED----RFLRNLVPFLGLAGSDTLAGAISMWHGN--GSHAAIFDNKEDLLDFSKARVF---GFEMASLLKDPIALGPVLIYLFHRISISLDGTPSIIVLDEAW-ALIDN-PVFAPKIKDWLKVLRKLNAFVVFATQSVEDASK---SAISDTLVQQTATQIFLPNLKATSIYRNVF-MLTEREYILIKHTDPSTRFFLVKQGINAVVARIDLKG-LDDIVNVLSGRAESVILLHDILKEVGDDPKVWLPIFYQKVKNV |
| 4AG6 Chain:A ((3-385)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGIND--GSGIVLGKDRDGGLVLVDIWKRGGDRTNSNWTILAKPGAGKSFTAKMLLLREYMQ--GSRVIIIDPEREYKEMCRKLGGVWINC--TGGEGKINPLQVRLRPQSPLALHIQTLRTFFSLYLRDLTDTEKAALEDALVEVYKEAGITWDTDPRGVPNDKWPTVKELYEYCVKKAEENPETYGRLSVLLKRAAEGADSYLWAGPTAVEADSDFIVFDVHDLQNAEDQVKRAQYFNVLSFAWNILERDRR-ERTVLVVDEAWMLVDPQTPQAIAFLRDTSKRIRKYNGSLIVISQNVIDFLAPEVQRYGQALLDNPTYKLLLAQGEKDLEAITTLMNLSEAEHDLLVNAKRGEGLFVAGTQRIHIKIEAAPYEMQY----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AG6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -213505 for 2692 contacts (-79.3/contact) +
2D Compatibility (PS) -35984 + (NN) -14718 + (LL) 34020
1D Compatibility (HY) -13200 + (ID) 2800
Total energy: -246187.0 ( -91.45 by residue)
QMean score : 0.390
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