Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYQYYNRIFNILLIIVLLLSNVTYADASESMHQIGSDIVVGLLKTEKETYPHELGLFQSIYEMFNSFGVRTVFIDCNKIINLKKIQEELLSLLKQDEMLAKKLILDRIKIEIGQFIKGHKINRIFIPENYYNLHSEPFPPTPCCQLVTEAIVKIVDDNPTIHLLSICGGLQGIMSAKGIEVVHVENFVSDEEQRRSHLKSAPNPQQEDVTFQQIKIVPNSHLAKVVAKFLLPDKNGWFSTCFPDAHSGTVNNRPENRRKLELLGYKIAAFSNDGVIEAIEDK-HGNIYFQSHPEALVVKSDKNLHLSNHKARQVSTLVAMAIINDFLYRA |
2VXO Chain:A ((29-207)) | ------------------------------------EGAVVILDAG---------YGKVIDRRVRELFVQSEIFPLETPAF-----------------------------AI--KE--QGFRAIIISGGP-------------A----PWFDPAIFTI-GKPVLGICYGMQMMNKVFGGTVHK---------------------------VFNISVDNTCSLFRGLQ----------KEEVVLLTHGDSVDKV--------ADGFKVVARSG-NIVAGIANESKKLYGAQFHPEVGLTENGKVILKNFLYDIAGCSGTFTVQNRELECIR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VXO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121771 for 1336 contacts (-91.1/contact) +
2D Compatibility (PS) -16841 + (NN) -42 + (LL) 9552
1D Compatibility (HY) -5200 + (ID) 1400
Total energy: -135702.0 ( -101.57 by residue)
QMean score : 0.378
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