Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITHMNMLI-LILLCGIVTLLIRIIPFIMISKVQLPDVVVRWLSFIPITLFTALVIDSIIQ-QTPHGEGYTLNIPYIIALIPTVILSIIT-RSLTITIISGIVIMATLRFFF
2DBS Chain:A ((7-86))
RLAELDGVLMQYLLEADLLRELPPTYRLVLLPLDEPEVAAQALAW---------------AMEAPNPEGW-----------PSVYALFLQGRPIRLLLLGKEVEVA------
General information:
TITO was launched using:
RESULT:
Template:
2DBS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54528 for 421 contacts (-129.5/contact) +
2D Compatibility (PS) -7621 + (NN) 2348 + (LL) 3748
1D Compatibility (HY) 400 + (ID) 300
Total energy: -55953.0 ( -132.90 by residue)
QMean score : 0.291
(partial model without unconserved sides chains):
PDB file :
Tito_2DBS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DBS-query.scw
PDB file :
Tito_Scwrl_2DBS.pdb
: