Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSLKTVIGMNNKEHIKSVILALLVLMSVVLTYMVWNFSPDIANVDNTDSKKSETKPLTTPMTAKMDTTITPFQIIHSKNDHPEGTIATVSNVNKLTKPLKNKEVKSVEHVRRDHNLMIPDLSSDFTLFDFTYDLPLSTYLGQVLNMNAKVPNHFNFNRLVIDHDADDNIVLYAISKDRHDYVKLTTTTKNDHFLDALAAVKKDMQPYTDIITNKDTIDRTTHVFAPSKPEKLKTYRMVFNTISVEKMNAILFDDSTIVRSSKSGVTTYNNNTGVANYNDKNEKYH-YKNLSEDEASSSKMEETIPGTFDFINGHGGFLNEDFRLFSTNNQSGELTYQRFLNGYPTFNKEGSNQIQVTWGEKGVFDYRRSLLRTDVV----LNSEDNKTLPKLESVRSSLANNSDINFEKVTNIAIGYEMQDN-SDHNHIEVQINSELVPRWYVEYDGEWYVYNDGRLE- |
| 4MT7 Chain:A ((96-432)) | ---------QNRDQMRANVINEIMSTERHYIKHLKDICEG-------------------------------YLKQCRKRRD--------MFSDEQLKVIFGN-----IEDIYRFQMGFVRDLEKQYNNDD-----PHLSEIGPCFLEH---QDGFWIYSEYCNNHLDACMELSKLMKD----------SRYQHFFEACRLLQQ-------------MIDIAIDGFLLTPVQKICKYPLQLAELLK--------------YTAQDHSDYRYVAAALAVMRNVTQQINERKRRLENIDKIAQWQASVL---------------DWEGDDILDRSSELIYTGEMAWI--YQPYGRNQQRVFF----LFDHQMVLCKKDLIRRDILYYKGRIDMDKYEVIDIEDGRDDDFN----VSMKNAFKLHNKETEEVHLFFAKKLEEKIRWLRAFREERKMVQEDEKIG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4MT7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 15855 for 2324 contacts (6.8/contact) +
2D Compatibility (PS) -34185 + (NN) -8467 + (LL) 6472
1D Compatibility (HY) -12800 + (ID) 2600
Total energy: -35725.0 ( -15.37 by residue)
QMean score : 0.146
|
|
|