Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRIVNGPIIMTREERMKIVHEIKERILDKYGDDVKAIGVYGSLGR-QTDGPYSDIEMMCVMSTEEAEFSHEWTTGEWKVEVNFDSEEILLDYASQVESDWPLTHGQFFSILPIYDSGGYLEKVYQTAKSVEAQTFHDAICALIVEELFEYAGKWRNIRVQGPTTFLPSLTVQVAMAGAMLIGLHHRICYTTSASVLTEAVKQSDLPSGYDHLCQFVMSGQLSDSEKLLESLENFWNGIQEWTERHGYIVDVSKRIPF |
2B4V Chain:A ((41-93)) | --------------AIRAQQQLQGLADKWTP--DAKVYCCGSMVTYGQMERGSDLDLACMFDDP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B4V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22323 for 238 contacts (-93.8/contact) +
2D Compatibility (PS) -5245 + (NN) -5233 + (LL) 15420
1D Compatibility (HY) -1200 + (ID) 250
Total energy: -18831.0 ( -79.12 by residue)
QMean score : 0.502
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