Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNYFRYKQFNKDVITVAVGYYLRYTLSYRDISEILRERGVNVHHSTVYRWVQEYAPILYQIWKKKHKKAYYKWRIDETYIKIKGKWSYLYRAIDAEGHTLDIWLRKQRDNHSAYAFIKRLIKQFGKPQKVITDQAPSTKVAM-AKVIKAFKLKPDCHC----TSKYLNNLIEQDHRHIKVRK-TRYQSINTAKNTLKGIECIYALYKKNRRSLQIYGFSPCHEISIMLAS |
| 3KKS Chain:A ((2-145)) | ---------------------------------------------------------------------SHLWQMDNTHW----NKTIIWVAVETNSGLVEAQVIPEETALQVALCILQLIQRYTV-LHLHSDNGPCFTAHRIENLCKY---LGITKTTGIPYNPQSQGVVERAHRDLKDRLAAYQGDCETVEAALSLALVSLNKKR-GG-IG---GHTPYEIYLE---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KKS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27229 for 1001 contacts (-27.2/contact) +
2D Compatibility (PS) -14634 + (NN) -6896 + (LL) 7632
1D Compatibility (HY) -1200 + (ID) 950
Total energy: -43277.0 ( -43.23 by residue)
QMean score : 0.264
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