Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MKRVSYSVETKYKAVEMKAAGFS----TKEIMKELNIKNRTQVETWWRWYRNGESYRFSQHVGKQYTYGKGLEELSEVEQLKLENKRKDIELDILKKYKALERKWYQQ-----
2RN7 Chain:A ((1-108))
MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTPETLRVWVRQHERDTGGDDGGLT------TAERQRLKEPERENRELRRSNDILRLASAYFAKAEFDRLWKK
General information:
TITO was launched using:
RESULT:
Template:
2RN7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2147 for 432 contacts (-5.0/contact) +
2D Compatibility (PS) -9753 + (NN) 751 + (LL) -44
1D Compatibility (HY) 3600 + (ID) 1050
Total energy: -8643.0 ( -20.01 by residue)
QMean score : 0.292
(partial model without unconserved sides chains):
PDB file :
Tito_2RN7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RN7-query.scw
PDB file :
Tito_Scwrl_2RN7.pdb
: