Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------------------------------------------------------------------------------MTQGWWFPVMASAFLIFTIVIMFIAGTGQYGLGEKGTVDAFVNGASSLVGVSLIIGLARGINLVLNKGMISDTILHFSSSIVQHMSGPLFIIVLLFIFFCLGFI--VPSSSGLAVLSMPIFAPLADTV--GIPRFVIVTTYQFGQYAMLFLAPT-----GLVMATLQMLNVRYSHWLRFVWPVVAFVL----IFGGGLLITQVLIYS--------------------------------------------------------------------------------------------------------------------- |
| 4L9P Chain:B ((68-519)) | VHPGIPALFREPPLIHDLLSTETTELQSETVNKCLPLLKGIHNSQKGPFNKYGIPALQRKDHLEYLYDSLEDYPASFVALDASRPWMVYWALAGLCLLGEDVTRFRERVISTFTAAQNSTGGIGGGHGQMSHVASSYAAVLSIAMVGGEEAFKLIDRKAMWKWLGKLKQPDGGFTVCEGGEED--VRGAYCAMVVHALLDLP--LALPPEAEARQNGLETFTDGLPEYLSR------------CQTYEGGISGSPGSEAHGAYAFCALACLCLLGRPEVVVPRYMNIATLLPWLSARQYAPEGGFSGRTNKLVDGCYSHWVGNCWPLVQAALDGTQPLAGPKRSSVGNLYSREGLTRYILSCCQCKLGGLRDKPGKHPDSYHTCYALTGLSTVQYYHYCTDSSVSSKDDFSSAFSWKHDPNFASDGQGSDIGVFTENDRLVPFHPIFVIPHKSAEDIRVWFENQSFDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L9P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181832 for 1299 contacts (-140.0/contact) +
2D Compatibility (PS) -17840 + (NN) 5498 + (LL) 1924
1D Compatibility (HY) -2800 + (ID) 1850
Total energy: -196900.0 ( -151.58 by residue)
QMean score : 0.071
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