Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFNKYYTKEEVVISTLQTLASKFEDLDID-SHDNLNSFKARIGSTIDKLAKAPPLNKYTFTELMIIISIIYFKNLYIGRLDKPSSRKKKGGNLIFEIVYNNQMLNSSTAKL
1G2Y Chain:D ((1-30))
------------------MVSKLSQLQTEMLAALLES-----GLSKEALIQAL----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1G2Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8152 for 103 contacts (79.1/contact) +
2D Compatibility (PS) -2882 + (NN) -283 + (LL) 6140
1D Compatibility (HY) -400 + (ID) 200
Total energy: 10527.0 ( 102.20 by residue)
QMean score : 0.179
(partial model without unconserved sides chains):
PDB file :
Tito_1G2Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G2Y-query.scw
PDB file :
Tito_Scwrl_1G2Y.pdb
: