Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDIVNIVIMLLIGVFGGFISGLVGVGGAIIIYPAILLLPPLFGAPAYSAYIASGLTSSQVFFSTLSGSLKARKKTEFSPQLVLYMGGGMIIGSMLGAFLA---NLFDATFVNTVYIIIALLALT-----LMFIKVKPSSEKSSFNKYLLVIIGLFIGIISGIVGAGGAFIIIPILLVLFKLPMNTVVANSIVIAFISSIGAFVI------------KLIQGYIPLYDALFLI-----IGSIIFAPIGLKLSKKVPNI------IQKWI-----ISILIVFAIVQLIL---------- |
3DNF Chain:A ((1-281)) | --MVDIIIAEHAGFCFGVKRAVKLAEESLKESQGKVYTL---GPIIHNPQEVNRLKNLGVFPSQGE---------EFKEGDTVIIRSHGIPPEKEEALRKKGLKVIDATCPYVKAVHEAVCQLTREGYFVVLVGEKNHPEVIGTLGYLRACNGK--GIVVETLEDIGEALKHERVGIVAQTTQNEEFFKEVVGEIALWVKEVKVINTICNATSLRQESVKKLAPEVDVMIIIGGKNSGNTRRLYYISKELNPNTYHIETAEELQPEWFRGVKRVGISAGASTPDWIIEQVKSRIQEI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DNF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -301790 for 1778 contacts (-169.7/contact) +
2D Compatibility (PS) -24116 + (NN) -145 + (LL) 1100
1D Compatibility (HY) -1600 + (ID) 1950
Total energy: -328501.0 ( -184.76 by residue)
QMean score : 0.188
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