Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDIVNIVIMLLIGVFGGFISGLVGVGGAIIIYPAILLLPPLFGAPAYSAYIASGLTSSQVFFSTLSGSLKARKKTEFSPQLVLYMGGGMIIGSMLGAFLA---NLFDATFVNTVYIIIALLALT-----LMFIKVKPSSEKSSFNKYLLVIIGLFIGIISGIVGAGGAFIIIPILLVLFKLPMNTVVANSIVIAFISSIGAFVI------------KLIQGYIPLYDALFLI-----IGSIIFAPIGLKLSKKVPNI------IQKWI-----ISILIVFAIVQLIL----------
3DNF Chain:A ((1-281))--MVDIIIAEHAGFCFGVKRAVKLAEESLKESQGKVYTL---GPIIHNPQEVNRLKNLGVFPSQGE---------EFKEGDTVIIRSHGIPPEKEEALRKKGLKVIDATCPYVKAVHEAVCQLTREGYFVVLVGEKNHPEVIGTLGYLRACNGK--GIVVETLEDIGEALKHERVGIVAQTTQNEEFFKEVVGEIALWVKEVKVINTICNATSLRQESVKKLAPEVDVMIIIGGKNSGNTRRLYYISKELNPNTYHIETAEELQPEWFRGVKRVGISAGASTPDWIIEQVKSRIQEI


General information:
TITO was launched using:
RESULT:

Template: 3DNF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -301790 for 1778 contacts (-169.7/contact) +
2D Compatibility (PS) -24116 + (NN) -145 + (LL) 1100
1D Compatibility (HY) -1600 + (ID) 1950
Total energy: -328501.0 ( -184.76 by residue)
QMean score : 0.188

(partial model without unconserved sides chains):
PDB file : Tito_3DNF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DNF-query.scw
PDB file : Tito_Scwrl_3DNF.pdb: