Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKRVNKLVLGISFL----FLIISIFA-------GCGTGKEAEIKKSFEKTLSMYPIKNLEDLYDKEGYRDDQFDKNDKGTWIVRSSMSIQSNGKDM--------NIKGMVLYMN--RNTRTTNGYYYVDVIEREDK----GIHRDNEKRYPVKMVDNKI-----IPTKEIKDEKIKKEIENFKF-------FVQYGDFKDL-----------------------SKYKDGDISYNPEVPSYSAKYQLTN-DDYNVKQLRKRYNIPTNKAPKLLLKGTGNLKGSSIGYKKIEFTFVEKKGENIYFSDGLHFNPSEDK |
| 4N74 Chain:A ((1-314)) | ---TQNTIETGVGYSTDVGPRVKATWKKPWVNSYGHSLTTSTSISAPEQTLDFSYKMPLLKNPLEQYYLVQGGFKRTDLNDTESDSTTLVASRYWDLSSGWQRAINLRWSVDHFTQGEITNTTMLFYPGVVISRTRSRGGLMPTWGDSQRYSIDYSNTAWGSDVDFSVFQAQNVWIRTLYDRHRFVTRGTLGWIETGDFDKVPPDLRFFAGGDRSIRGYKYKSIAPKYANGDLKGASKLITGSLEYQYNVTGKWWGAVFVDSGEAVSDIRRSDFKTGTGVGVRWESPVGPIKLDFAVPVADKDEHGLQFYIGLGPEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N74.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 93545 for 1600 contacts (58.5/contact) +
2D Compatibility (PS) -26299 + (NN) 5746 + (LL) 476
1D Compatibility (HY) -2800 + (ID) 1950
Total energy: 68718.0 ( 42.95 by residue)
QMean score : 0.032
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