Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLNTLVLYISFLILIISIVAGCGTGKEAEIKKSFEKTLS-------MYPIKNLEDLYDKEGYR--DDEFDKNDKGTWTISSEMAIQKKGEALNIKGMVLKLNRNTRSA-KGFYYVNAIKKDENGRPQDKQIEYPVKMIDN------------------------------KIIPTKDIKDEKIKKEIENFKFFAQYGNFKDLTK---YKGGDISY---------NPEAPIY-----------------------SAKYQLTNDDYNVKQLRKRYDIPTNKAPKLLLKGSGNLDGSSIGYKKIEFTFVEKKGENT---------YFTANLHFKPS---NDE------------------ |
| 3RFY Chain:A ((78-433)) | ----GGILLVANPVIPDVSVLISGPPIKDPEALLRYALPIDNKAIREVQKPLEDITDSLKIAGVKALDSVERNVRQASRTLQQGKSIIVAGFAESKKDHGNEMIEKLEAGMQDMLKIVEDRKRDAVAPKQKEILKYVGGIEEDMVDGFPYEVPEEYRNMPLLKGRASVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLVERHFYDGMEIQRSDGFVVQTGDPEGPAEGFIDPSTEKTRTVPLEIMVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQVFWLLKESELTPSNSNILDGRYAVFGYVTDNEDFLADLKVGDVIESIQVVSGLENLANPSY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 32782 for 1460 contacts (22.5/contact) +
2D Compatibility (PS) -26353 + (NN) 1075 + (LL) 548
1D Compatibility (HY) -3200 + (ID) 2350
Total energy: 2502.0 ( 1.71 by residue)
QMean score : 0.116
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