Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLNKLVLGISFLFLVISITAGCGMGKEAEIKKSFEKTMSMYPIKNLEDLYDKEGYRDDQFDKNDKGTWIVNSQMAIQNKGEPMKSKGMVLYMNRNTRTTNGYYYVNVIKGEDKGKHQDNEKRYPVKMVDNKII-LTKEIKDENIKIEIENFKFFVQYGNFKDLENYKDGDISYNPEVPSYSAKYQLTNDDYNVKQLRKRYDIPTNKAPKLLLKGTGNLKGSSVGYKDIEFTFVEKKEENIYFSDGLIFKPSEDK |
| 1IVN Chain:A ((1-179)) | ---------ADTLLILGDSLSAGYRMSASAAWPALLNDKWSKTSVVN----------------ASISGDTSQQGLARLPALLKQHQPRWVLVELGGN----------------------DGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQIRLPANYG--------RRYNEAFSAIYPKLAKEFDVPLLPFFMEEVYLKPQWMQD----------DGIHPNRDAQPFIADWMAKQLQPLVN------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3027 for 1448 contacts (2.1/contact) +
2D Compatibility (PS) -18928 + (NN) -2920 + (LL) 3804
1D Compatibility (HY) -4400 + (ID) 900
Total energy: -20317.0 ( -14.03 by residue)
QMean score : 0.280
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