Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------MTQEIAKYNVHTKAHKRKLIKRWLIAIVVLAIII---------WAFAGVPSLELKSKSLEILKSIFSGLFHPDISYIYIPDGEDLLRGLL---ETFAIAVVGTFIAAIICIP--------LAFLGANNMVKLRP------------------------VSGVSKFILSVIRVFPEIVMALIFIKAVGPGSFSGV-------------LALGIHSVGMLGKLLAEDIE----------------------------------GLDFSAVESLKASGANKIKTLVFAVIPQIMPA------FLSLILYRFELNLRSASILGLIGAGGIGTPLIFAIQTRSWDRVGIILIGLVLMVAIVDLISGSIRKRIV |
| 1BGY Chain:C ((1-379)) | MTNIRKSHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTFLETWNIGVILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIMAIAMVHLLFLHETGSNNPTGISSDVDKIPFHPYYTIKDILGALLLILALMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAFSILILALIPLLHTSKQRSMMFRPLSQCLFWALVADLLTLTWIGGQPVEHPYITIGQLASVLYFLLILVLMPTAGTIENKLLKW------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BGY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156667 for 1779 contacts (-88.1/contact) +
2D Compatibility (PS) -27088 + (NN) -7184 + (LL) 864
1D Compatibility (HY) -16800 + (ID) 2400
Total energy: -209275.0 ( -117.64 by residue)
QMean score : 0.225
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