Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------METIKQEVRESIVKG-IIAGYKDYVNERNEVKKRMVISDAYAFTKSNHIESQVAKHLENFVKYIKENAGPSWKYLKFIFNKDEEKNNIMFILKNEDYFDEKNVSVGKSLVADKN-PKSKNYLEVLMAKNRDINFGTVGEDFEIGHQMTADSILFNIKEGSNRDINSYFLIITY--RIDKESKQLAAIKQWLPN---PETNSAIMVDDLTELIEKVIVEREDYHIDEEELEVLKNDGELELIDVEHAFGISIDE---GNDMIESER |
| 3NUT Chain:A ((8-247)) | SGWVTVAGLGPGREDLVTPEVTAALAEATDIVGYIPYVARIAPREGLTLHPTDNRVELDRATHALEMAAEGRRVVVVSSGDPGVFAMASALFEALEAHPEH----AGTEIRILPGITAMLAAAAAAGAPLGHDFCAINLSDNLK----------------PFEILEKRLRHAARGD----FAMAFYNPRSKSRPHQFTRVLEILREECEPGRLILFARA----------VTTPEQAISVVELRDAT----PEMADMRTVVLVGNAATRRVGPWVYTPR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NUT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8866 for 1547 contacts (-5.7/contact) +
2D Compatibility (PS) -22528 + (NN) 1140 + (LL) 2708
1D Compatibility (HY) -3600 + (ID) 1350
Total energy: -32496.0 ( -21.01 by residue)
QMean score : 0.173
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