Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQSGQISIEEPGLQEVYEEVLSSGKLKVST----TPEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLE---KGNTIIVESTIAPKTMDDFVKPVIENLGFTIGEDICLVHCPERVLPGKILEELVHNNRIIGG-VTKACIEAGKYVYRTFVQGEMIETDARTAEMSKLMENTYRDVNIALANELTKICNNLNINVLDVIEMANKHPRV--NIHQPGPGVGGHCLAVDPYFIIAKDPE---NAKLIQTGREINNSMPAYVVDTTKQIIKALSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIEVCAYDPHVELD-F--------VEHDMSHAVKDASLVLILSDHSEFKNLSDSHFDKMKHKVIFDTKNVVKSSFEDVSYYNYGNIFNFIDK |
| 3VTF Chain:A ((22-444)) | ASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAATDATFIAVGTPPAP--DGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVAR-AVAEEAG-GVKFSVASNPEFLREGSALEDFFKPDRIVIGAGDERAASFLLDVYKAVD-APKLVMKPREAELVKYASNVFLALKISFANEVGLLAKRLGVDTYRVFEAVGLDKRIGRHYFGAGLGFGGSCFPKDTLAFIRFGESLGLEMAISKAVLRVNEYMPRYAVQLLEERLGGLRGRHVGVLGLAFKPNTDDVRESRGVEVARLLLER-GARVYVHDPMAMEKARAVLGDSVTYVEDPQALLDQVEGVIIATAWPQYEGLDYR------GKVVVDGRYVKKAR-EAKIYEGVAWA------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VTF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -211896 for 3549 contacts (-59.7/contact) +
2D Compatibility (PS) -43654 + (NN) -13069 + (LL) 1364
1D Compatibility (HY) -19200 + (ID) 5400
Total energy: -291855.0 ( -82.24 by residue)
QMean score : 0.520
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