Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLILIVIGLIFTALGIAGAVLPLLPTTPFLLVAVFCFARSSDRFYNWLI-NQKIYKEY--VENFYLHRGYTLQQKIKILISLYIVIGFSIYMVDVLAVRVGLIIMVIIQTAVLFTFVKTLPKSNHKIEE
1X4R Chain:A ((1-99))
---------------GSSGSSGKSIRLAKEKE----SQADYISTYVEWQYIDKNITQCFDKMTNMKLEVAWKAKKK-----DTVVQIHNQDFTVDLST-------NTATAPQGQTFTVQRLVKASGPSSG
General information:
TITO was launched using:
RESULT:
Template:
1X4R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67237 for 528 contacts (-127.3/contact) +
2D Compatibility (PS) -10133 + (NN) -1125 + (LL) 4584
1D Compatibility (HY) 3600 + (ID) 700
Total energy: -71011.0 ( -134.49 by residue)
QMean score : 0.039
(partial model without unconserved sides chains):
PDB file :
Tito_1X4R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X4R-query.scw
PDB file :
Tito_Scwrl_1X4R.pdb
: