Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKVGIVGGSGYGAIELIRLLQTHPH-----VTIAHIYSHSKVDEPLKLTFPHLQHIMQHFEAL--TVDNNDCDVIFFATPAPVSKTCIPPLVEKGIHVIDLSGAFRIKNREIYEAYYKETAAAQDDLNHAIYSISEWQ--SFDNNGTKLISNPGCFPTATLLALHPLISEKIVDLS-SIIIDAKTGVSGAGRSLSQRVHFSEMNENLSAYAIG-NHKHKPEIEQYLSIIAGQDVSVIFTPHLVPMTRGILSTIYVKFSSEYTTESLHKLMTSYYANQPFVRIRDIGTFPTTKEVLGSNYCDIGIYVDETTQTAILVSVIDNLVKGASGQAIQNLNILYDFEVTTGLNQSPVYP |
| 2NQT Chain:A ((9-352)) | ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEAAVLGGHDAVFLALPHGHSAVLAQQLS-PETLIIDCGADFRLTDAAVWERFYGSSHA-----GSWPYGLPELPGARDQLRGTRRIAVPG-YPTAALLALFPALAADLI--EPAVTVVAVSGTSGAGRAATTDLLGAEVIGSARAYNIAGVHRHTPEIAQGLRAVTDRDVSVSFTPVLIPASRGILATCTARTRSP--LSQLRAAYEKAYHAEPFIYLMPEGQLPRTGAVIGSNAAHIAVAVDEDAQTFVAIAAIDNLVKGTAGAAVQSMNLALGWPETDGLSVVGVAP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -229287 for 2950 contacts (-77.7/contact) +
2D Compatibility (PS) -35565 + (NN) -9716 + (LL) 692
1D Compatibility (HY) -14400 + (ID) 5550
Total energy: -293826.0 ( -99.60 by residue)
QMean score : 0.477
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