Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKVLNIFTIAFKSILKNKGRNIFTMIGIIIGISSVITIMSLGNGFKKTAADQFSDAGAGKQEALISFTFKVDEKIKKYPFNQRDIELV-NQVDGVLDAKLK--EN-K--E--EGI--EATITNVQKKSDIFIIKKQNLHSFKVGRGFDKEDNELRKKIVVINDQVAKTVFNNNAIGKSLYIE----GQGFEVIGITDKL-Y--SDSSTVIMPENTFNYYMG-HL-HQGLPTLQIIIEDGYNKKTVVKKVESLLNKKGSGSVLGEYTYTDTEEIIKSIDKIFDSITYFVAAVAGISLFIAGIGVMNVMYISVAERTEEIAIRRAFGAKSRDIELQFLIESILICVTSGFIGLILGVVFATIIDVLTPDYIKSVVSLSSVIIAVSVSILIGLLFGWIPARAASKKELIDIIK |
| 3IS6 Chain:A ((44-204)) | -------------------------------------------------------------------------------------APAIQEEIPGVELATRTTLYGTSKMILEDNKTYETKTLL--AEPAFLDMF--GV-ELIAGVRDSALR---DNMTCLISESLARKMG-GDVLGKRLRPAESKSDRAITIGGVFEDLPHNSSIQADMLLPITWMPAESLNNWIGNDRYIAYVRLRPGVSPESLDEALLEMQK------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IS6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17587 for 949 contacts (-18.5/contact) +
2D Compatibility (PS) -14716 + (NN) 2684 + (LL) 20884
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -12285.0 ( -12.95 by residue)
QMean score : 0.334
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