Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTINKVTVLGAGTMGAQLAALFVNAGLKVKLLDI---VVDKNDPNLIAKKSYDKITDKKRPLLFDLNLVSHLTYGNFDDDLVNDDADLYIEAVKEDIEIKHAVWQQVLQHAKEDALFATNTSGIPINAIAQAFNEKDQERFFGLHFFNPPRIMKLVELIPTSHTKESIILDVKNFAQNVLGKGVIVVNDVPGFVANRVGTQTMNDIMYRAEQHKLSIVDVDALTGQAIGRPKTGTYALSDLVGLDIAVSVIKGMQQVPEETPYFHDVKIVNTLFDNGALGRKTKQGFYKKDKETKARLVYDVEKQDYVPVSQPQLPILNEFNKDLVHNLDVIFNAQDEAGLFLWETLRNNFYYSAINVPKATDDFRDIDRALVWGFNWKLGPFQLWDAMGYERVKTRMEDELGDLPQWISDLDGGFYKQDETIEYATPVSHFVKDELWDKGDAKLSVTHDDQLLLKLQSKNNVITDEFNDALVDAIDLLENDHYTSMVIYADGNNFSVGANLFLMKKAHEDGLVDDVVAQSIDKLHYSFNRLKYSLKPVVTAVQGRALGGGCELVLYSPIVVAASETYIGLVEAGVGLLPSGGGLAEMADRILRTSHKFDDKQASMTKVLTNIAFAKVSTNAFEARRYGYLRDTDTIIFNTAQRVEVALKRAKYEAETNYIPNPRHQYIALGEDFKALIQGQLDAQRRGHFISDHDYHIALNIATILAGGDLPRNTFINQRYIQSLEKIGFIDLLKSKKSYERIAHMLKTGKPLRN |
4KUG Chain:C ((1-278)) | --MKKVFVLGAGTMGAGIVQAFAAKGCEVIVRDIKEEFVDRGIATIT--KSLSKLVAKEKITEADKEEILSRISGTTDMKLAAD-CDLVVEAAIENMKIKKEIFAELDGICKPETILASNTSSLSITEVASATKRAD--KVIGMHFFNPAPVMKLVEVIRGAATSQETFDAVKEMSESI-GKTPVEVAEAPGFVVNRILIPMINEATFILQEGVAKEEDIDAAMKLGANHP-MGPLALGDLIGLDVCLAIMDVLYNETGDTKY-RASSLLRKYVRAGWLGRKTGKGFY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KUG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152728 for 2318 contacts (-65.9/contact) +
2D Compatibility (PS) -29485 + (NN) -12465 + (LL) 32388
1D Compatibility (HY) -16800 + (ID) 4550
Total energy: -183640.0 ( -79.22 by residue)
QMean score : 0.348
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