Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MKFKKVLVATAMVGVL---------ATGVVGYGNQADAKVYSQN---------GLVLHDDANFLEHELSYIDVL-----LDKNADQATKDNLRSYFADKGLHSIKDIINKAKQDGFDVSKYEHVK---------
1IUK Chain:A ((1-136))
MNDQELRAYLSQAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDVFRPPSALMDHLPEVLALRPGLVWLQSGIRH-PEFEKALKEAGIPVVADRCLMVEHKRLFRG
General information:
TITO was launched using:
RESULT:
Template:
1IUK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28658 for 730 contacts (-39.3/contact) +
2D Compatibility (PS) -10736 + (NN) -260 + (LL) 204
1D Compatibility (HY) -5200 + (ID) 850
Total energy: -45500.0 ( -62.33 by residue)
QMean score : 0.414
(partial model without unconserved sides chains):
PDB file :
Tito_1IUK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IUK-query.scw
PDB file :
Tito_Scwrl_1IUK.pdb
: